![]() |
Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
|
Home BLAST Prediction RegMap ATRM Download Help About Links |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.supercontig_92.68 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 671aa MW: 72988.6 Da PI: 6.5825 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.3 | 1.6e-13 | 237 | 299 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e kr r+++NRe+A+ sRqRKk ++eeLe+kv ++ + +L ++++ e a+l++++ evm.model.supercontig_92.68 237 EEEEKRKARLMRNRESAQLSRQRKKHYVEELEDKVRTMHSTIADLNSKISYFMAENATLRQQL 299 6899****************************************************9999986 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 2.6E-12 | 237 | 299 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 2.9E-17 | 237 | 301 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.473 | 239 | 299 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.8E-18 | 241 | 300 | No hit | No description |
SuperFamily | SSF57959 | 2.33E-12 | 241 | 299 | No hit | No description |
CDD | cd14704 | 1.39E-22 | 242 | 293 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 671 aa Download sequence Send to blast |
MAEQLLTEQP PAPDTNHTFC SEFDTLPVPP LDPLFLPGSD YTTNDNLKAD LGFGFEEDGD 60 IELTFDDLDD LYFPSETEPF IIPVSAQAKS SQGCSGNFNP ESGGFGISGD HSVDVVDSYM 120 NWWSPESVSC DRGYPKVQSS QDSGDGCPEA TTSMNFPSPA SSHGSGVSEA VNTSSADSRN 180 PVVDEKIKVK EIGKNSVTKR KKDSEDATGE SRTNKFRRSF VPSENTNSDE VSVTTNEEEE 240 KRKARLMRNR ESAQLSRQRK KHYVEELEDK VRTMHSTIAD LNSKISYFMA ENATLRQQLS 300 GGAGICPPPP GMYSPMAPMP YPWMPCPPYV VKSQGSQVPL VPIPRLKPQQ PVSASKPKKG 360 ESKKGVSRTK KVASISFLGL LFFIVLFGGL IPVINVKYGG TYDNVDIVSG YVNDRFYDQH 420 RGRVLTVSSQ SNGSDKNIGI GFSKVNFDTS NRIHYKRGHS GGSSDGADPE DGRSSSKENV 480 PLGNSSESLV ASLYVPRNDK LVKIDGNLII HSVLASEKAM ASRKDNRETG LAIPTALAIP 540 DVRRSGRIHS HLYRSANERQ KALSSGSTNT LKDHFKSSAA DGKLQQWFRE GVADGMQPSA 600 QKDNFPGNKS ASSMVVSILV DPREAGDADI DGMIAPKSLS RIFVVVLMDS VKYVTYSCVL 660 PRSSPHLVTA * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_006430509.1 | 1e-178 | hypothetical protein CICLE_v10011169mg | ||||
Swissprot | O22208 | 1e-151 | BZP17_ARATH; bZIP transcription factor 17 | ||||
TrEMBL | V4UVN2 | 1e-178 | V4UVN2_9R | ||||
STRING | scaffold_402899.1 | 1e-153 | (Arabidopsis lyrata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM8881 | 27 | 37 | Representative plant | OGRP2171 | 16 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-141 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | evm.model.supercontig_92.68 |